3D imaging of supraspinal inputs to the thoracic and lumbar spinal cord mapped by retrograde tracing and light-sheet microscopy

Tao Lu, Munehisa Shinozaki, Narihito Nagoshi, Masaya Nakamura, Hideyuki Okano

Research output: Contribution to journalArticlepeer-review

3 Citations (Scopus)


The supraspinal inputs play a major role in tuning the hindlimb locomotion function. While most research on spinal cord injury (SCI) with rodents is based on thoracic segments, the difference in connectivity of the supraspinal centers to the thoracic and lumbar cord is still unknown. Here, we combined retrograde tracing and 3D imaging to map the connectivity of supraspinal neurons projecting to thoracic (T9-vertebral) and lumbar (T13-vertebral) spinal levels in adult female mice. We dissected the difference in connections of corticospinal neurons (CSNs), rubrospinal neurons, and reticulospinal neurons projecting to thoracic and lumbar cords. The ratio of double-labeled neurons is higher in T13-vertebral projection CSNs and parvocellular part of the red nucleus (RPC) than in T9-vertebral projection. Using the Cre-DIO system, we precisely targeted CSNs projecting to T9-vertebral or T13-vertebral. We found that abundant axon branches communicated with the red nucleus and reticular formation and distributed from cervical gray matter to the lumbar cord. Their collateral branches showed a distinct innervation pattern in thoracic and lumbar gray matters and a similar distribution pattern in the cervical spinal cord. These results revealed the difference in connectivity between the thoracic and lumbar projection supraspinal centers and clarified the collateralization of thoracic/lumbar projection CSNs throughout the brain and spinal cord. This study highlights brain-spinal cord neural networks and the complexity of the axon terminals of spinal projection CSNs, which could contribute to the development of targeted therapeutic strategies connecting CST fibers and hindlimb function recovery. (Figure presented.) Cover Image for this issue: https://doi.org/10.1111/jnc.15414.

Original languageEnglish
Pages (from-to)352-370
Number of pages19
JournalJournal of Neurochemistry
Issue number4
Publication statusPublished - 2022 Aug


  • collateral branches
  • innervation pattern
  • light-sheet microscopy
  • retrograde tracing
  • supraspinal inputs
  • tissue clearing

ASJC Scopus subject areas

  • Biochemistry
  • Cellular and Molecular Neuroscience


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