Comparative genomics of Medaka and fugu

Nobuyoshi Shimizu; Takashi Sasaki; Shuichi Asakawa; Atsushi Shimizu; Sabine K. Ishikawa; Shuichiro Imai; Yuji Murayama; Heinz Himmelbauer; Hiroshi Mitani; Makoto Furutani-Seiki; Hisato Kondoh; Manfred Schartl; Masaru Nonaka; Hiroyuki Takeda; Hiroshi Hori; Akihiro Shima

doi:10.1016/j.cbd.2005.10.008

Comparative genomics of Medaka and fugu

Nobuyoshi Shimizu, Takashi Sasaki, Shuichi Asakawa, Atsushi Shimizu, Sabine K. Ishikawa, Shuichiro Imai, Yuji Murayama, Heinz Himmelbauer, Hiroshi Mitani, Makoto Furutani-Seiki, Hisato Kondoh, Manfred Schartl, Masaru Nonaka, Hiroyuki Takeda, Hiroshi Hori, Akihiro Shima

Center for Supercentenarian Medical Research

Research output: Contribution to journal › Review article › peer-review

8 Citations (Scopus)

Abstract

A small freshwater fish medaka (Oryzias latipes) has been one of the most attractive experimental systems for research in genetics and developmental biology. We have formed an international consortium Medaka Genome Initiative (MGI) to collect and share various information and resources on medaka. The MGI has set an ambitious goal aiming at the complete sequencing of the medaka genome and as a feasibility study we have begun sequencing one particular chromosome, linkage group 22 (LG22) of ∼22 Mb in size. Initial sequence analysis revealed unique features of the medaka genome in comparison to fugu genome.

Original language	English
Pages (from-to)	6-12
Number of pages	7
Journal	Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics
Volume	1
Issue number	1 SPEC. ISS.
DOIs	https://doi.org/10.1016/j.cbd.2005.10.008
Publication status	Published - 2006 Mar

Keywords

Comparative genomics
Fugu
Medaka

ASJC Scopus subject areas

Biochemistry
Physiology
Molecular Biology
Genetics

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10.1016/j.cbd.2005.10.008

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Shimizu, N., Sasaki, T., Asakawa, S., Shimizu, A., Ishikawa, S. K., Imai, S., Murayama, Y., Himmelbauer, H., Mitani, H., Furutani-Seiki, M., Kondoh, H., Schartl, M., Nonaka, M., Takeda, H., Hori, H., & Shima, A. (2006). Comparative genomics of Medaka and fugu. Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics, 1(1 SPEC. ISS.), 6-12. https://doi.org/10.1016/j.cbd.2005.10.008

Shimizu, N, Sasaki, T, Asakawa, S, Shimizu, A, Ishikawa, SK, Imai, S, Murayama, Y, Himmelbauer, H, Mitani, H, Furutani-Seiki, M, Kondoh, H, Schartl, M, Nonaka, M, Takeda, H, Hori, H & Shima, A 2006, 'Comparative genomics of Medaka and fugu', Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics, vol. 1, no. 1 SPEC. ISS., pp. 6-12. https://doi.org/10.1016/j.cbd.2005.10.008

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title = "Comparative genomics of Medaka and fugu",

abstract = "A small freshwater fish medaka (Oryzias latipes) has been one of the most attractive experimental systems for research in genetics and developmental biology. We have formed an international consortium Medaka Genome Initiative (MGI) to collect and share various information and resources on medaka. The MGI has set an ambitious goal aiming at the complete sequencing of the medaka genome and as a feasibility study we have begun sequencing one particular chromosome, linkage group 22 (LG22) of ∼22 Mb in size. Initial sequence analysis revealed unique features of the medaka genome in comparison to fugu genome.",

keywords = "Comparative genomics, Fugu, Medaka",

author = "Nobuyoshi Shimizu and Takashi Sasaki and Shuichi Asakawa and Atsushi Shimizu and Ishikawa, {Sabine K.} and Shuichiro Imai and Yuji Murayama and Heinz Himmelbauer and Hiroshi Mitani and Makoto Furutani-Seiki and Hisato Kondoh and Manfred Schartl and Masaru Nonaka and Hiroyuki Takeda and Hiroshi Hori and Akihiro Shima",

note = "Funding Information: This work was supported by a Grant-in-Aid for Scientific Research on Priority Area #813 from the Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT).",

year = "2006",

month = mar,

doi = "10.1016/j.cbd.2005.10.008",

language = "English",

volume = "1",

pages = "6--12",

journal = "Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics",

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T1 - Comparative genomics of Medaka and fugu

AU - Shimizu, Nobuyoshi

AU - Sasaki, Takashi

AU - Asakawa, Shuichi

AU - Shimizu, Atsushi

AU - Ishikawa, Sabine K.

AU - Imai, Shuichiro

AU - Murayama, Yuji

AU - Himmelbauer, Heinz

AU - Mitani, Hiroshi

AU - Furutani-Seiki, Makoto

AU - Kondoh, Hisato

AU - Schartl, Manfred

AU - Nonaka, Masaru

AU - Takeda, Hiroyuki

AU - Hori, Hiroshi

AU - Shima, Akihiro

N1 - Funding Information: This work was supported by a Grant-in-Aid for Scientific Research on Priority Area #813 from the Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT).

PY - 2006/3

Y1 - 2006/3

N2 - A small freshwater fish medaka (Oryzias latipes) has been one of the most attractive experimental systems for research in genetics and developmental biology. We have formed an international consortium Medaka Genome Initiative (MGI) to collect and share various information and resources on medaka. The MGI has set an ambitious goal aiming at the complete sequencing of the medaka genome and as a feasibility study we have begun sequencing one particular chromosome, linkage group 22 (LG22) of ∼22 Mb in size. Initial sequence analysis revealed unique features of the medaka genome in comparison to fugu genome.

AB - A small freshwater fish medaka (Oryzias latipes) has been one of the most attractive experimental systems for research in genetics and developmental biology. We have formed an international consortium Medaka Genome Initiative (MGI) to collect and share various information and resources on medaka. The MGI has set an ambitious goal aiming at the complete sequencing of the medaka genome and as a feasibility study we have begun sequencing one particular chromosome, linkage group 22 (LG22) of ∼22 Mb in size. Initial sequence analysis revealed unique features of the medaka genome in comparison to fugu genome.

KW - Comparative genomics

KW - Fugu

KW - Medaka

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AN - SCOPUS:33644549114

SN - 1744-117X

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JO - Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics

JF - Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics

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ER -

Comparative genomics of Medaka and fugu

Abstract

Keywords

ASJC Scopus subject areas

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