Development of new microsatellite markers from a salt-marsh sedge Carex rugulosa by compound simple sequence repeat-polymerase chain reaction

K. Ohbayashi; Y. Hodoki; S. Nakayama; M. Shimada; H. Kunii

doi:10.1111/j.1755-0998.2008.02212.x

Development of new microsatellite markers from a salt-marsh sedge Carex rugulosa by compound simple sequence repeat-polymerase chain reaction

K. Ohbayashi, Y. Hodoki, S. Nakayama, M. Shimada, H. Kunii

Research output: Contribution to journal › Article › peer-review

7 Citations (Scopus)

Abstract

We developed 12 polymorphic microsatellite markers from a salt-marsh sedge Carex rugulosa. The number of alleles per locus ranged from two to four, with an average of 2.75. The observed and expected heterozygosities ranged from 0.067 to 0.600 and from 0.128 to 0.620, respectively. These simple sequence repeat markers will allow the identification of genets and evaluation of the genetic diversity of C. rugulosa.

Original language	English
Pages (from-to)	1497-1499
Number of pages	3
Journal	Molecular Ecology Resources
Volume	8
Issue number	6
DOIs	https://doi.org/10.1111/j.1755-0998.2008.02212.x
Publication status	Published - 2008 Nov
Externally published	Yes

Keywords

Carex rugulosa
Compound microsatellite marker
SSR
Salt-marsh sedge

ASJC Scopus subject areas

Biotechnology
Ecology, Evolution, Behavior and Systematics
Genetics

Access to Document

10.1111/j.1755-0998.2008.02212.x

Cite this

@article{d058d7b9b01d4a2a8b0dbd9fdda26dd4,

title = "Development of new microsatellite markers from a salt-marsh sedge Carex rugulosa by compound simple sequence repeat-polymerase chain reaction",

abstract = "We developed 12 polymorphic microsatellite markers from a salt-marsh sedge Carex rugulosa. The number of alleles per locus ranged from two to four, with an average of 2.75. The observed and expected heterozygosities ranged from 0.067 to 0.600 and from 0.128 to 0.620, respectively. These simple sequence repeat markers will allow the identification of genets and evaluation of the genetic diversity of C. rugulosa.",

keywords = "Carex rugulosa, Compound microsatellite marker, SSR, Salt-marsh sedge",

author = "K. Ohbayashi and Y. Hodoki and S. Nakayama and M. Shimada and H. Kunii",

year = "2008",

month = nov,

doi = "10.1111/j.1755-0998.2008.02212.x",

language = "English",

volume = "8",

pages = "1497--1499",

journal = "Molecular Ecology Resources",

issn = "1755-098X",

publisher = "Wiley-Blackwell",

number = "6",

}

TY - JOUR

T1 - Development of new microsatellite markers from a salt-marsh sedge Carex rugulosa by compound simple sequence repeat-polymerase chain reaction

AU - Ohbayashi, K.

AU - Hodoki, Y.

AU - Nakayama, S.

AU - Shimada, M.

AU - Kunii, H.

PY - 2008/11

Y1 - 2008/11

N2 - We developed 12 polymorphic microsatellite markers from a salt-marsh sedge Carex rugulosa. The number of alleles per locus ranged from two to four, with an average of 2.75. The observed and expected heterozygosities ranged from 0.067 to 0.600 and from 0.128 to 0.620, respectively. These simple sequence repeat markers will allow the identification of genets and evaluation of the genetic diversity of C. rugulosa.

AB - We developed 12 polymorphic microsatellite markers from a salt-marsh sedge Carex rugulosa. The number of alleles per locus ranged from two to four, with an average of 2.75. The observed and expected heterozygosities ranged from 0.067 to 0.600 and from 0.128 to 0.620, respectively. These simple sequence repeat markers will allow the identification of genets and evaluation of the genetic diversity of C. rugulosa.

KW - Carex rugulosa

KW - Compound microsatellite marker

KW - SSR

KW - Salt-marsh sedge

UR - http://www.scopus.com/inward/record.url?scp=55149088144&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=55149088144&partnerID=8YFLogxK

U2 - 10.1111/j.1755-0998.2008.02212.x

DO - 10.1111/j.1755-0998.2008.02212.x

M3 - Article

C2 - 21586087

AN - SCOPUS:55149088144

SN - 1755-098X

VL - 8

SP - 1497

EP - 1499

JO - Molecular Ecology Resources

JF - Molecular Ecology Resources

IS - 6

ER -

Development of new microsatellite markers from a salt-marsh sedge Carex rugulosa by compound simple sequence repeat-polymerase chain reaction

Abstract

Keywords

ASJC Scopus subject areas

Access to Document

Other files and links

Fingerprint

Cite this