TY - JOUR
T1 - Optimal Replica-Exchange Molecular Simulations in Combination with Evolution Strategies
AU - Kowaguchi, Akie
AU - Endo, Katsuhiro
AU - Brumby, Paul E.
AU - Nomura, Kentaro
AU - Yasuoka, Kenji
N1 - Publisher Copyright:
© 2022 American Chemical Society.
PY - 2022/12/26
Y1 - 2022/12/26
N2 - We have incorporated Evolution Strategies into the Replica-Exchange Monte Carlo simulation method to predict the phase behavior of several example fluids. The replica-exchange method allows one system to exchange temperatures with its neighbors to search for the most stable structure relatively efficiently in a single simulation. However, if the temperature intervals of the replicas are not positioned carefully, there is an issue that local exchange does not occur. Our results for a simple Lennard-Jones fluid and the liquid-crystal Yukawa model demonstrate the utility of the approach when compared to conventional methods. When Evolution Strategies were applied to the Replica-Exchange Monte Carlo simulation, the problem of a significant localized decrease in exchange probability near the phase transition was avoided. By obtaining the optimal temperature intervals, the system efficiently traverses a broader parameter space with a small number of replicas. This is equivalent to accelerating molecular simulations with limited computational resources and can be useful when attempting to predict the phase behavior of complex systems.
AB - We have incorporated Evolution Strategies into the Replica-Exchange Monte Carlo simulation method to predict the phase behavior of several example fluids. The replica-exchange method allows one system to exchange temperatures with its neighbors to search for the most stable structure relatively efficiently in a single simulation. However, if the temperature intervals of the replicas are not positioned carefully, there is an issue that local exchange does not occur. Our results for a simple Lennard-Jones fluid and the liquid-crystal Yukawa model demonstrate the utility of the approach when compared to conventional methods. When Evolution Strategies were applied to the Replica-Exchange Monte Carlo simulation, the problem of a significant localized decrease in exchange probability near the phase transition was avoided. By obtaining the optimal temperature intervals, the system efficiently traverses a broader parameter space with a small number of replicas. This is equivalent to accelerating molecular simulations with limited computational resources and can be useful when attempting to predict the phase behavior of complex systems.
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U2 - 10.1021/acs.jcim.2c00608
DO - 10.1021/acs.jcim.2c00608
M3 - Article
C2 - 35785994
AN - SCOPUS:85134801531
SN - 1549-9596
VL - 62
SP - 6544
EP - 6552
JO - Journal of Chemical Information and Modeling
JF - Journal of Chemical Information and Modeling
IS - 24
ER -