年別の研究成果
年別の研究成果
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2023
Automatic Detection and Measurement of Renal Cysts in Ultrasound Images: A Deep Learning Approach
Kanauchi, Y., Hashimoto, M., Toda, N., Okamoto, S., Haque, H., Jinzaki, M. & Sakakibara, Y., 2023 2月, In: Healthcare (Switzerland). 11, 4, 484.研究成果: Article › 査読
Open Access1 被引用数 (Scopus) -
Column-free purification of an artificial protein nanocage, TIP60
Nasu, E., Kawakami, N., Ohara, N., Hayashi, K. & Miyamoto, K., 2023 5月, In: Protein Expression and Purification. 205, 106232.研究成果: Article › 査読
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Distribution changes of non-self-test cells and self-tunic cells surrounding the outer body during Ciona metamorphosis
Totsuka, N. M., Kuwana, S., Sawai, S., Oka, K., Sasakura, Y. & Hotta, K., 2023 11月, In: Developmental Dynamics. 252, 11, p. 1363-1374 12 p.研究成果: Article › 査読
Open Access1 被引用数 (Scopus) -
Dual Modification of Artificial Protein Cage
Kawakami, N., Nasu, E. & Miyamoto, K., 2023, Methods in Molecular Biology. Humana Press Inc., p. 147-156 10 p. (Methods in Molecular Biology; vol. 2671).研究成果: Chapter
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Effect of the side chain composition of mixed-charge polymers on pH-selective cell–membrane interactions
Nakamura, Y., Nasu, M., Shindo, Y., Oka, K., Citterio, D. & Hiruta, Y., 2023 11月, In: Polymer Journal. 55, 11, p. 1179-1188 10 p.研究成果: Article › 査読
1 被引用数 (Scopus) -
Endocytosis-Like Vesicle Fission Mediated by a Membrane-Expanding Molecular Machine Enables Virus Encapsulation for In Vivo Delivery
Uchida, N., Ryu, Y., Takagi, Y., Yoshizawa, K., Suzuki, K., Anraku, Y., Ajioka, I., Shimokawa, N., Takagi, M., Hoshino, N., Akutagawa, T., Matsubara, T., Sato, T., Higuchi, Y., Ito, H., Morita, M. & Muraoka, T., 2023 3月 22, In: Journal of the American Chemical Society. 145, 11, p. 6210-6220 11 p.研究成果: Article › 査読
Open Access1 被引用数 (Scopus) -
High-density scalp electroencephalogram dataset during sensorimotor rhythm-based brain-computer interfacing
Iwama, S., Morishige, M., Kodama, M., Takahashi, Y., Hirose, R. & Ushiba, J., 2023 12月, In: Scientific Data. 10, 1, 385.研究成果: Article › 査読
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Hydrophobization of a TIP60 Protein Nanocage for the Encapsulation of Hydrophobic Compounds
Yamashita, M., Kawakami, N. & Miyamoto, K., 2023 3月, In: ChemPlusChem. 88, 3, e202200392.研究成果: Article › 査読
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Modulation of sensorimotor oscillation by sensory gating in the frontal cortex
Fujiwara, Y., Takahashi, O. & Ushiba, J., 2023 1月 14, In: NeuroReport. 34, 1, p. 9-16 8 p.研究成果: Article › 査読
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Quantum Algorithm for Position Weight Matrix Matching
Miyamoto, K., Yamamoto, N. & Sakakibara, Y., 2023, In: IEEE Transactions on Quantum Engineering. 4, 3101214.研究成果: Article › 査読
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Reversible Assembly of an Artificial Protein Nanocage Using Alkaline Earth Metal Ions
Ohara, N., Kawakami, N., Arai, R., Adachi, N., Moriya, T., Kawasaki, M. & Miyamoto, K., 2023 1月 11, In: Journal of the American Chemical Society. 145, 1, p. 216-223 8 p.研究成果: Article › 査読
2 被引用数 (Scopus) -
Revisiting oxytocin generation in keratinocytes
Fujimoto, K., Inada, K., Oka, K. & Ito, E., 2023, In: Biophysics and physicobiology. 20, 1, e200003.研究成果: Article › 査読
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RNA Secondary Structure Prediction Based on Energy Models
Akiyama, M. & Sato, K., 2023, Methods in Molecular Biology. Humana Press Inc., p. 89-105 17 p. (Methods in Molecular Biology; vol. 2586).研究成果: Chapter
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The sialyl-Tn antigen synthase genes regulates migration–proliferation dichotomy in prostate cancer cells under hypoxia
Yamamoto, D., Hongo, H., Kosaka, T., Aoki, N., Oya, M. & Sato, T., 2023 4月, In: Glycoconjugate Journal. 40, 2, p. 199-212 14 p.研究成果: Article › 査読
1 被引用数 (Scopus) -
Thirty-minute motor imagery exercise aided by EEG sensorimotor rhythm neurofeedback enhances morphing of sensorimotor cortices: a double-blind sham-controlled study
Kodama, M., Iwama, S., Morishige, M. & Ushiba, J., 2023 6月 1, In: Cerebral Cortex. 33, 11, p. 6573-6584 12 p.研究成果: Article › 査読
3 被引用数 (Scopus) -
Titanium Culture Vessel Presenting Temperature Gradation for the Thermotolerance Estimation of Cells
Imashiro, C., Jin, Y., Hayama, M., Yamada, T. G., Funahashi, A., Sakaguchi, K., Umezu, S. & Komotori, J., 2023, In: Cyborg and Bionic Systems. 4, 0049.研究成果: Article › 査読
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Transitions of motor neuron activities during Ciona development
Utsumi, M. K., Oka, K. & Hotta, K., 2023 1月 13, In: Frontiers in Cell and Developmental Biology. 11, 1100887.研究成果: Article › 査読
Open Access2 被引用数 (Scopus) -
2022
Accelerated transgene expression of pDNA/polysaccharide complexes by solid-phase reverse transfection and analysis of the cell transfection mechanism
Arai, T., Aiki, Y. & Sato, T., 2022 4月, In: Polymer Journal. 54, 4, p. 603-613 11 p.研究成果: Article › 査読
2 被引用数 (Scopus) -
A Comparison of Bioinformatics Pipelines for Enrichment Illumina Next Generation Sequencing Systems in Detecting SARS-CoV-2 Virus Strains
Afiahayati, Bernard, S., Gunadi, Wibawa, H., Hakim, M. S., Marcellus, Parikesit, A. A., Dewa, C. K. & Sakakibara, Y., 2022 8月, In: Genes. 13, 8, 1330.研究成果: Article › 査読
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Admp regulates tail bending by controlling ventral epidermal cell polarity via phosphorylated myosin localization in Ciona
Kogure, Y. S., Muraoka, H., Koizumi, W. C., Gelin-Alessi, R., Godard, B., Oka, K., Heisenberg, C. P. & Hotta, K., 2022 11月, In: Development (Cambridge). 149, 21, dev200215.研究成果: Article › 査読
Open Access1 被引用数 (Scopus) -
AI and computational chemistry-accelerated development of an alotaketal analogue with conventional PKC selectivity
Maki, J., Oshimura, A., Tsukano, C., Yanagita, R. C., Saito, Y., Sakakibara, Y. & Irie, K., 2022 5月 18, In: Chemical Communications. 58, 47, p. 6693-6696 4 p.研究成果: Article › 査読
5 被引用数 (Scopus) -
An explainable deep learning-based algorithm with an attention mechanism for predicting the live birth potential of mouse embryos
Tokuoka, Y., Yamada, T. G., Mashiko, D., Ikeda, Z., Kobayashi, T. J., Yamagata, K. & Funahashi, A., 2022 12月, In: Artificial Intelligence in Medicine. 134, 102432.研究成果: Article › 査読
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Annual rhythmicity in the switching of reproductive mode in planarians
Nodono, H. & Matsumoto, M., 2022 12月, In: Zoology. 155, 126053.研究成果: Article › 査読
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Beta rhythmicity in human motor cortex reflects neural population coupling that modulates subsequent finger coordination stability
Iwama, S., Yanagisawa, T., Hirose, R. & Ushiba, J., 2022 12月, In: Communications biology. 5, 1, 1375.研究成果: Article › 査読
Open Access2 被引用数 (Scopus) -
BioSimulators: a central registry of simulation engines and services for recommending specific tools
Shaikh, B., Smith, L. P., Vasilescu, D., Marupilla, G., Wilson, M., Agmon, E., Agnew, H., Andrews, S. S., Anwar, A., Beber, M. E., Bergmann, F. T., Brooks, D., Brusch, L., Calzone, L., Choi, K., Cooper, J., Detloff, J., Drawert, B., Dumontier, M., Ermentrout, G. B., & 55 others, 2022 7月 5, In: Nucleic acids research. 50, W1, p. W108-W114研究成果: Article › 査読
Open Access6 被引用数 (Scopus) -
Brain-machine Interface (BMI)-based Neurorehabilitation for Post-stroke Upper Limb Paralysis
Liu, M. & Ushiba, J., 2022, In: Keio Journal of Medicine. 71, 4, p. 82-92 11 p.研究成果: Review article › 査読
Open Access4 被引用数 (Scopus) -
Cell-Size Space Regulates the Behavior of Confined Polymers: From Nano- and Micromaterials Science to Biology
Yanagisawa, M., Watanabe, C., Yoshinaga, N. & Fujiwara, K., 2022 10月 4, In: Langmuir. 38, 39, p. 11811-11827 17 p.研究成果: Review article › 査読
5 被引用数 (Scopus) -
Characterization of the membrane penetration-enhancing peptide S19 derived from human syncytin-1 for the intracellular delivery of TAT-fused proteins
Suzuki, M., Iwaki, K., Kikuchi, M., Fujiwara, K. & Doi, N., 2022 1月 1, In: Biochemical and Biophysical Research Communications. 586, p. 63-67 5 p.研究成果: Article › 査読
Open Access5 被引用数 (Scopus) -
Controlling the Periodicity of a Reaction-Diffusion Wave in Artificial Cells by a Two-Way Energy Supplier
Takada, S., Yoshinaga, N., Doi, N. & Fujiwara, K., 2022 10月 25, In: ACS Nano. 16, 10, p. 16853-16861 9 p.研究成果: Article › 査読
3 被引用数 (Scopus) -
Counterfactual Explanation of Brain Activity Classifiers Using Image-To-Image Transfer by Generative Adversarial Network
Matsui, T., Taki, M., Pham, T. Q., Chikazoe, J. & Jimura, K., 2022 3月 16, In: Frontiers in Neuroinformatics. 15, 802938.研究成果: Article › 査読
Open Access3 被引用数 (Scopus) -
Cytoplasmic delivery of siRNA using human-derived membrane penetration-enhancing peptide
Nakamura, M., Fujiwara, K. & Doi, N., 2022 12月, In: Journal of Nanobiotechnology. 20, 1, 458.研究成果: Article › 査読
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Deep Residual Convolutional Neural Networks for Brain–Computer Interface to Visualize Neural Processing of Hand Movements in the Human Brain
Fujiwara, Y. & Ushiba, J., 2022 5月 20, In: Frontiers in Computational Neuroscience. 16, 882290.研究成果: Article › 査読
Open Access4 被引用数 (Scopus) -
De Novo Brain-Computer Interfacing Deforms Manifold of Populational Neural Activity Patterns in Human Cerebral Cortex
Iwama, S., Zhang, Y. & Ushiba, J., 2022 11月 1, In: eNeuro. 9, 6, ENEURO.0145-22.2022.研究成果: Article › 査読
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De Novo Design of Star-Shaped Glycoligands with Synthetic Polymer Structures toward an Influenza Hemagglutinin Inhibitor
Nagao, M., Yamaguchi, A., Matsubara, T., Hoshino, Y., Sato, T. & Miura, Y., 2022 3月 14, In: Biomacromolecules. 23, 3, p. 1232-1241 10 p.研究成果: Article › 査読
1 被引用数 (Scopus) -
Description of a model tardigrade Paramacrobiotus metropolitanus sp. nov. (Eutardigrada) from Japan with a summary of its life history, reproduction and genomics
Sugiura, K., Matsumoto, M. & Kunieda, T., 2022 5月 9, In: Zootaxa. 5134, 1, p. 92-112 21 p.研究成果: Article › 査読
6 被引用数 (Scopus) -
Detection of Influenza Virus by Agglutination of Microparticles Immobilized a Mixed Glycan Receptor Produced from Cells
Matsubara, T., Ogami, A., Kori, H., Hashizume, M. & Sato, T., 2022, (Accepted/In press) In: ACS Applied Bio Materials.研究成果: Article › 査読
1 被引用数 (Scopus) -
Development of non-bias phenotypic drug screening for cardiomyocyte hypertrophy by image segmentation using deep learning
Komuro, J., Tokuoka, Y., Seki, T., Kusumoto, D., Hashimoto, H., Katsuki, T., Nakamura, T., Akiba, Y., Kuoka, T., Kimura, M., Yamada, T., Fukuda, K., Funahashi, A. & Yuasa, S., 2022 12月 3, In: Biochemical and Biophysical Research Communications. 632, p. 181-188 8 p.研究成果: Article › 査読
1 被引用数 (Scopus) -
Dihydromaniwamycin E, a Heat-Shock Metabolite from Thermotolerant Streptomyces sp. JA74, Exhibiting Antiviral Activity against Influenza and SARS-CoV-2 Viruses
Saito, S., Funayama, K., Kato, W., Okuda, M., Kawamoto, M., Matsubara, T., Sato, T., Sato, A., Otsuguro, S., Sasaki, M., Orba, Y., Sawa, H., Maenaka, K., Shindo, K., Imoto, M. & Arai, M. A., 2022 11月 25, In: Journal of Natural Products. 85, 11, p. 2583-2591 9 p.研究成果: Article › 査読
Open Access1 被引用数 (Scopus) -
Direct Inference of Base-Pairing Probabilities with Neural Networks Improves Prediction of RNA Secondary Structures with Pseudoknots
Akiyama, M., Sakakibara, Y. & Sato, K., 2022 11月 18, In: Genes. 13, 11, 2155.研究成果: Article › 査読
Open Access2 被引用数 (Scopus) -
Dorsolateral prefrontal cortex sensing analgesia
Ito, E., Oka, K. & Koshikawa, F., 2022, In: Biophysics and physicobiology. 19, e190014.研究成果: Article › 査読
Open Access5 被引用数 (Scopus) -
Effective Cell Transfection in An Ultrasonically Levitated Droplet for Sustainable Technology
Arai, T., Sato, T. & Matsubara, T., 2022 10月 25, In: Advanced Science. 9, 30, 2203576.研究成果: Article › 査読
Open Access5 被引用数 (Scopus) -
Erratum: Two Bioactive Compounds, Uniformides A and B, Isolated from a Culture of Nocardia uniformis IFM0856Tin the Presence of Animal Cells (Organic Letters (2022) 24:27 (4998-5002) DOI: 10.1021/acs.orglett.2c02092)
Hara, Y., Watanabe, K., Takaya, A., Ebihara, I., Manome, T., Arai, M. A., Yaguchi, T. & Ishibashi, M., 2022 8月 12, In: Organic Letters. 24, 31, p. 5867 1 p.研究成果: Comment/debate › 査読
Open Access -
Executive control by fronto-parietal activity explains counterintuitive decision behavior in complex value-based decision-making
Matsui, T., Hattori, Y., Tsumura, K., Aoki, R., Takeda, M., Nakahara, K. & Jimura, K., 2022 4月 1, In: NeuroImage. 249, 118892.研究成果: Article › 査読
Open Access5 被引用数 (Scopus) -
Functional analysis of GCNT3 for cell migration and EMT of castration-resistant prostate cancer cells
Yamamoto, D., Sasaki, K., Kosaka, T., Oya, M. & Sato, T., 2022 9月 19, In: Glycobiology. 32, 10, p. 897-908 12 p.研究成果: Article › 査読
2 被引用数 (Scopus) -
Functional reorganization of locomotor kinematic synergies reflects the neuropathology in a mouse model of spinal cord injury
Sato, Y., Kondo, T., Shibata, R., Nakamura, M., Okano, H. & Ushiba, J., 2022 4月, In: Neuroscience Research. 177, p. 78-84 7 p.研究成果: Article › 査読
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Ganglioside Nanocluster-Targeting Peptidyl Inhibitor Prevents Amyloid β Fibril Formation on the Neuronal Membrane
Matsubara, T., Nakai, M., Nishihara, M., Miyamoto, E. & Sato, T., 2022 7月 6, In: ACS Chemical Neuroscience. 13, 13, p. 1868-1876 9 p.研究成果: Article › 査読
2 被引用数 (Scopus) -
Generation of Fusarium oxysporum-suppressive soil with non-soil carriers using a multiple-parallel-mineralization technique
Meeboon, J., Ando, A., Ogawa, J., Miyamoto, K., Kato, Y. & Shinohara, M., 2022 12月, In: Scientific reports. 12, 1, 7968.研究成果: Article › 査読
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Graph Kernels Encoding Features of All Subgraphs by Quantum Superposition
Kishi, K., Satoh, T., Raymond, R., Yamamoto, N. & Sakakibara, Y., 2022 9月 1, In: IEEE Journal on Emerging and Selected Topics in Circuits and Systems. 12, 3, p. 602-613 12 p.研究成果: Article › 査読
Open Access2 被引用数 (Scopus) -
Guanine nucleotide exchange factor DOCK11-binding peptide fused with a single chain antibody inhibits hepatitis B virus infection and replication
Ide, M., Tabata, N., Yonemura, Y., Shirasaki, T., Murai, K., Wang, Y., Ishida, A., Okada, H., Honda, M., Kaneko, S., Doi, N., Ito, S. & Yanagawa, H., 2022 7月, In: Journal of Biological Chemistry. 298, 7, 102097.研究成果: Article › 査読
Open Access6 被引用数 (Scopus) -
High quality genome assembly of the anhydrobiotic midge provides insights on a single chromosome-based emergence of extreme desiccation tolerance
Yoshida, Y., Shaikhutdinov, N., Kozlova, O., Itoh, M., Tagami, M., Murata, M., Nishiyori-Sueki, H., Kojima-Ishiyama, M., Noma, S., Cherkasov, A., Gazizova, G., Nasibullina, A., Deviatiiarov, R., Shagimardanova, E., Ryabova, A., Yamaguchi, K., Bino, T., Shigenobu, S., Tokumoto, S., Miyata, Y., & 6 others, 2022 6月 1, In: NAR Genomics and Bioinformatics. 4, 2, lqac029.研究成果: Article › 査読
Open Access3 被引用数 (Scopus)