TY - GEN
T1 - Extremely imbalanced subarachnoid hemorrhage detection based on DenseNet-LSTM network with class-balanced loss and transfer learning
AU - Lu, Zhongyang
AU - Oda, Masahiro
AU - Hayashi, Yuichiro
AU - Hu, Tao
AU - Itoh, Hayato
AU - Watadani, Takeyuki
AU - Abe, Osamu
AU - Hashimoto, Masahiro
AU - Jinzaki, Masahiro
AU - Mori, Kensaku
N1 - Funding Information:
Thank for the help and advices from the members of Mori laboratory and AMED NII team. A part of this research was supported by the AMED Grant Numbers JP19lk1010036, JP20lk1010036, and JSPS KAKENHI 26108006, 17K20099, 17H00867.
Publisher Copyright:
© COPYRIGHT SPIE. Downloading of the abstract is permitted for personal use only.
PY - 2021
Y1 - 2021
N2 - Subarachnoid Hemorrhage (SAH) detection is a critical, severe problem that confused clinical residents for a long time. With the rise of deep learning technologies, SAH detection made a significant breakthrough in recent ten years. Whereas, the performances are significantly degraded on imbalanced data, makes deep learning models have always suffered criticism. In this study, we present a DenseNet-LSTM network with Class-Balanced Loss and the transfer learning strategy to solve the SAH detection problem on an extremely imbalanced dataset. Compared to the previous works, the proposed framework not merely effectively integrate greyscale features the and spatial information from the consecutive CT scans, but also employ Class-Balanced loss and transfer learning to alleviate the adverse effects and broaden feature diversity respectively on an extreme SAH cases scarcity dataset, mimicking the actual situation of emergency departments. Comprehensive experiments are conducted on a dataset, consisted of 2,519 cases without hemorrhage cases and only 33 cases with SAH. Experimental results demonstrate the F-measure score of SAH detection achieved a remarkable improvement, the backbone DenseNet121 gained around 33% promotion after transfer learning, and on this basis, importing the Class-Balanced Loss and the LSTM structure, the F-measure score further increased 6.1% and 2.7% sequentially.
AB - Subarachnoid Hemorrhage (SAH) detection is a critical, severe problem that confused clinical residents for a long time. With the rise of deep learning technologies, SAH detection made a significant breakthrough in recent ten years. Whereas, the performances are significantly degraded on imbalanced data, makes deep learning models have always suffered criticism. In this study, we present a DenseNet-LSTM network with Class-Balanced Loss and the transfer learning strategy to solve the SAH detection problem on an extremely imbalanced dataset. Compared to the previous works, the proposed framework not merely effectively integrate greyscale features the and spatial information from the consecutive CT scans, but also employ Class-Balanced loss and transfer learning to alleviate the adverse effects and broaden feature diversity respectively on an extreme SAH cases scarcity dataset, mimicking the actual situation of emergency departments. Comprehensive experiments are conducted on a dataset, consisted of 2,519 cases without hemorrhage cases and only 33 cases with SAH. Experimental results demonstrate the F-measure score of SAH detection achieved a remarkable improvement, the backbone DenseNet121 gained around 33% promotion after transfer learning, and on this basis, importing the Class-Balanced Loss and the LSTM structure, the F-measure score further increased 6.1% and 2.7% sequentially.
KW - Class-Balanced loss
KW - DenseNet-LSTM
KW - Imbalanced data
KW - Subarachnoid Hemorrhage detection
UR - http://www.scopus.com/inward/record.url?scp=85103688413&partnerID=8YFLogxK
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U2 - 10.1117/12.2582088
DO - 10.1117/12.2582088
M3 - Conference contribution
AN - SCOPUS:85103688413
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Medical Imaging 2021
A2 - Mazurowski, Maciej A.
A2 - Drukker, Karen
PB - SPIE
T2 - Medical Imaging 2021: Computer-Aided Diagnosis
Y2 - 15 February 2021 through 19 February 2021
ER -