Implementation of ReCSiP: A ReConfigurable cell SImulation Platform

Yasunori Osana, Tomonori Fukushima, Hideharu Amano

研究成果: Chapter

4 被引用数 (Scopus)

抄録

A reconfigurable accelerator for cell simulators called "ReCSiP" is proposed. It consists of both reconfigurable hardware and software platform. For high performance simulation, numerical solution of kinetic formulas, which require a large amount of computation, are processed on the reconfigurable hardware. It also provides programming interface for developing cell simulators. In this paper, Michaelis-Menten solver is designed and implemented on ReCSiP. The result of preliminary evaluation shows that ReCSiP is 8 times faster than Intel PentiumIII 1.13GHz when simple metabolic simulations are executed.

本文言語English
ホスト出版物のタイトルLecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
編集者Peter Y. K. Cheung, George A. Constantinides, Jose T. de Sousa
出版社Springer Verlag
ページ766-775
ページ数10
ISBN(電子版)3540408223, 9783540408222
DOI
出版ステータスPublished - 2003

出版物シリーズ

名前Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2778
ISSN(印刷版)0302-9743
ISSN(電子版)1611-3349

ASJC Scopus subject areas

  • 理論的コンピュータサイエンス
  • コンピュータ サイエンス(全般)

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