Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)

Daichi Shigemizu; Fuyuki Miya; Shintaro Akiyama; Shujiro Okuda; Keith A. Boroevich; Akihiro Fujimoto; Hidewaki Nakagawa; Kouichi Ozaki; Shumpei Niida; Yonehiro Kanemura; Nobuhiko Okamoto; Shinji Saitoh; Mitsuhiro Kato; Mami Yamasaki; Tatsuo Matsunaga; Hideki Mutai; Kenjiro Kosaki; Tatsuhiko Tsunoda

doi:10.1038/s41598-018-28698-y

Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)

Daichi Shigemizu, Fuyuki Miya, Shintaro Akiyama, Shujiro Okuda, Keith A. Boroevich, Akihiro Fujimoto, Hidewaki Nakagawa, Kouichi Ozaki, Shumpei Niida, Yonehiro Kanemura, Nobuhiko Okamoto, Shinji Saitoh, Mitsuhiro Kato, Mami Yamasaki, Tatsuo Matsunaga, Hideki Mutai, Kenjiro Kosaki, Tatsuhiko Tsunoda

医学部臨床遺伝学センター

研究成果: Comment/debate › 査読

抄録

This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3)." should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).".

本文言語	English
論文番号	10367
ジャーナル	Scientific reports
巻	8
号	1
DOI	https://doi.org/10.1038/s41598-018-28698-y
出版ステータス	Published - 2018 12月 1

ASJC Scopus subject areas

一般

文献へのアクセス

10.1038/s41598-018-28698-y

他のファイルとリンク

フィンガープリント

「Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)」の研究トピックを掘り下げます。これらがまとまってユニークなフィンガープリントを構成します。

引用スタイル

Shigemizu, D., Miya, F., Akiyama, S., Okuda, S., Boroevich, K. A., Fujimoto, A., Nakagawa, H., Ozaki, K., Niida, S., Kanemura, Y., Okamoto, N., Saitoh, S., Kato, M., Yamasaki, M., Matsunaga, T., Mutai, H., Kosaki, K., & Tsunoda, T. (2018). Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z). Scientific reports, 8(1), 記事 10367. https://doi.org/10.1038/s41598-018-28698-y

Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z). / Shigemizu, Daichi; Miya, Fuyuki; Akiyama, Shintaro その他.
In: Scientific reports, Vol. 8, No. 1, 10367, 01.12.2018.

研究成果: Comment/debate › 査読

Shigemizu, D, Miya, F, Akiyama, S, Okuda, S, Boroevich, KA, Fujimoto, A, Nakagawa, H, Ozaki, K, Niida, S, Kanemura, Y, Okamoto, N, Saitoh, S, Kato, M, Yamasaki, M, Matsunaga, T, Mutai, H, Kosaki, K & Tsunoda, T 2018, 'Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)', Scientific reports, vol. 8, no. 1, 10367. https://doi.org/10.1038/s41598-018-28698-y

Shigemizu D, Miya F, Akiyama S, Okuda S, Boroevich KA, Fujimoto A その他. Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z). Scientific reports. 2018 12月 1;8(1):10367. doi: 10.1038/s41598-018-28698-y

@article{452ce77dab4543d3b0fed3b9b9da7b3d,

title = "Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)",

abstract = "This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).{"} should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).{"}.",

author = "Daichi Shigemizu and Fuyuki Miya and Shintaro Akiyama and Shujiro Okuda and Boroevich, {Keith A.} and Akihiro Fujimoto and Hidewaki Nakagawa and Kouichi Ozaki and Shumpei Niida and Yonehiro Kanemura and Nobuhiko Okamoto and Shinji Saitoh and Mitsuhiro Kato and Mami Yamasaki and Tatsuo Matsunaga and Hideki Mutai and Kenjiro Kosaki and Tatsuhiko Tsunoda",

note = "Publisher Copyright: {\textcopyright} 2018 The Author(s).",

year = "2018",

month = dec,

day = "1",

doi = "10.1038/s41598-018-28698-y",

language = "English",

volume = "8",

journal = "Scientific reports",

issn = "2045-2322",

publisher = "Nature Publishing Group",

number = "1",

}

TY - JOUR

T1 - Publisher Correction

T2 - IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis (Scientific Reports (2018) DOI: 10.1038/s41598-018-23978-z)

AU - Shigemizu, Daichi

AU - Miya, Fuyuki

AU - Akiyama, Shintaro

AU - Okuda, Shujiro

AU - Boroevich, Keith A.

AU - Fujimoto, Akihiro

AU - Nakagawa, Hidewaki

AU - Ozaki, Kouichi

AU - Niida, Shumpei

AU - Kanemura, Yonehiro

AU - Okamoto, Nobuhiko

AU - Saitoh, Shinji

AU - Kato, Mitsuhiro

AU - Yamasaki, Mami

AU - Matsunaga, Tatsuo

AU - Mutai, Hideki

AU - Kosaki, Kenjiro

AU - Tsunoda, Tatsuhiko

PY - 2018/12/1

Y1 - 2018/12/1

N2 - This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3)." should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).".

AB - This Article contains an error in the Results section under the subheading 'Performance comparison among call methods using simulation data'. We found that when the insertions were ?2 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3)." should read: We found that when the insertions were ?25 bp length and contained repetitive sequence from the flanking region, de novo assembly (Inchworm) did not work well (Table S3).".

UR - http://www.scopus.com/inward/record.url?scp=85049507265&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85049507265&partnerID=8YFLogxK

U2 - 10.1038/s41598-018-28698-y

DO - 10.1038/s41598-018-28698-y

M3 - Comment/debate

C2 - 29970886

AN - SCOPUS:85049507265

SN - 2045-2322

VL - 8

JO - Scientific reports

JF - Scientific reports

IS - 1

M1 - 10367

ER -